<div dir="ltr">Thank you for your help! <br clear="all"><div><div dir="ltr" class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div><font face="Times New Roman" size="4">Paris</font></div></div></div></div></div></div><br></div><br><div class="gmail_quote"><div dir="ltr">Elaine Meng <<a href="mailto:meng@cgl.ucsf.edu">meng@cgl.ucsf.edu</a>> 於 2018年11月16日 週五 上午1:31寫道：<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi Paris,<br>
If you are using the tool dialogs (Tools… Structure Analysis… FIndHBond, Find Clashes/Contacts) they have checkbox options to “Write information to file".  Click the Help button on the dialogs to see their help pages, or view the same information on our web site:<br>
<br>
<<a href="http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/findhbond/findhbond.html" rel="noreferrer" target="_blank">http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/findhbond/findhbond.html</a>><br>
<<a href="http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/findclash/findclash.html" rel="noreferrer" target="_blank">http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/findclash/findclash.html</a>><br>
<br>
Or, if you are using the commands “findhbond” (or “hbonds”) or “findclash” they each have a “saveFile” option.<br>
<br>
<<a href="http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/hbonds.html" rel="noreferrer" target="_blank">http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/hbonds.html</a>><br>
<<a href="http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/findclash.html" rel="noreferrer" target="_blank">http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/findclash.html</a>><br>
<br>
I hope this helps,<br>
Elaine<br>
-----<br>
Elaine C. Meng, Ph.D.<br>
UCSF Chimera(X) team<br>
Department of Pharmaceutical Chemistry<br>
University of California, San Francisco<br>
<br>
> On Nov 14, 2018, at 6:06 PM, Paris Tzou <<a href="mailto:paristzou@gmail.com" target="_blank">paristzou@gmail.com</a>> wrote:<br>
> <br>
> Hi,<br>
>    I have a structure of protein-DNA complex. How can I export the list of hydrogen bonding and clash/contact, please?<br>
> Thanks a lot,<br>
> Paris<br>
<br>
</blockquote></div>