<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
Good day<br />
I like the mapping sequence conservation tool in chimera, however I ran into a problem that IĀ could not overcome with anything IĀ found online.<br />
I have the consensus mapped onto my protein but that is not what IĀ want. IĀ want to show how the residues of my protein are conserved. For example at a particular residue the consensus is a C but in my structure its a W. at the moment the W is colored to be highly conserved based on the consenus of the C. The W is maybe 15% conserved, how can IĀ map the conservation of my sequence compared to all the other sequences.<br />
IĀ hope IĀ explained what my issue is<br />
Thank you for this great tool<br />
Matthias Fellner<br />