<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi Luca,<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>Three things:</div><div class=""><br class=""></div><div class="">1) You should probably open sessions with File->Restore Session rather than File->Open</div><div class="">2) You shouldn’t be being asked to identify the file type, since the file name has a known suffix type (.py: Python). Make sure that the “File type” selector near the bottom left of the File->Open dialog is set to “all (guess type)” rather than “all (ask type)”</div><div class="">3) Even if you are asked the type, you should pick “Python” for .py files. It looks like you picked “Chimera commands”, which interprets the file as Chimera commands rather than as Python code.</div><div class=""><br class=""></div><div class="">—Eric</div><div class=""><br class=""><div class="">
<div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><div class=""><span class="Apple-tab-span" style="white-space: pre;"> </span>Eric Pettersen</div><div class=""><span class="Apple-tab-span" style="white-space: pre;"> </span>UCSF Computer Graphics Lab</div><div class=""><br class=""></div></div>
</div>
<br class=""><div><blockquote type="cite" class=""><div class="">On Jun 30, 2016, at 1:26 AM, Luca Pellegrini <<a href="mailto:lp212@cam.ac.uk" class="">lp212@cam.ac.uk</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div class="">Hi,<br class=""><br class="">When I try to open a chimera session file, Chimera asks me to identify the file type, and then stops with the error message below. Can you please advice? I am using MacOSX 10.11.3.<br class=""><br class="">Best regards,<br class="">Luca<br class=""><br class="">***<br class="">You are now running Chimera version 1.11 (build 41141).<br class="">Your previous version was 1.10.1 (build 40415).<br class="">Check the release notes for new features and other info.<br class="">(To access the release notes, use the Help menu to bring up the User's Guide.<br class="">Then click the 'Documentation index' link and you will then see a link<br class="">for the release notes.)<br class="">Registration file "/Users/lp212/.chimera/registration" has expired.<br class=""><br class="">Error while sourcing SsoCdc45.py, line 0:<br class=""><br class=""><span class="Apple-tab-span" style="white-space:pre"> </span>"import cPickle, base64"<br class=""><br class="">Unrecognized command: "import"<br class="">Error while sourcing SsoCdc45.py, line 0:<br class=""><br class=""><span class="Apple-tab-span" style="white-space:pre"> </span>"import cPickle, base64"<br class=""><br class="">Unrecognized command: "import"<br class="">Error while sourcing SsoCdc45.py, line 0:<br class=""><br class=""><span class="Apple-tab-span" style="white-space:pre"> </span>"import cPickle, base64"<br class=""><br class="">Unrecognized command: "import"<br class="">Model 0 (Cdc45_depo.pdb) appears to be a protein without secondary structure assignments.<br class="">Automatically computing assignments using 'ksdssp' and parameter values:<br class=""> energy cutoff -0.5<br class=""> minimum helix length 4<br class=""> minimum strand length 3<br class="">Use command 'help ksdssp' for more information.<br class=""><br class=""><br class=""><br class="">Luca Pellegrini, PhD<br class="">Department of Biochemistry<br class="">University of Cambridge<br class="">80 Tennis Court Road<br class="">Cambridge CB2 1GA<br class="">UK<br class=""><br class="">Email: <a href="mailto:lp212@cam.ac.uk" class="">lp212@cam.ac.uk</a><br class="">Phone: 0044-1223-760469<br class=""><br class=""><br class=""><br class=""><br class=""><br class=""><br class=""><br class=""><br class=""><br class=""><br class=""><br class=""><br class="">_______________________________________________<br class="">Chimera-users mailing list: <a href="mailto:Chimera-users@cgl.ucsf.edu" class="">Chimera-users@cgl.ucsf.edu</a><br class="">Manage subscription: <a href="http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users" class="">http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users</a><br class=""></div></div></blockquote></div><br class=""></div></body></html>