<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi George,<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>In the Save EPS dialog you need to change the “extent” setting from “visible region” to “entire alignment”. Also, it <i class="">is</i> showing the histogram (at the top of the alignment). I think you mean the dendrogram (on the left of the alignment)? Anyway, when you save EPS in this situation it should actually produce two files, one that ends in “-alignment.eps” (that contains the alignment) and one ending in “-names.eps” (that contains the dendrogram and sequence names). Unfortunately it is an implementation limitation that it cannot produce a combined file, though in some cases it is useful to have the “-names” file available separately.</div><div class=""><br class=""></div><div class="">—Eric</div><div class=""><br class=""><div apple-content-edited="true" class="">
<div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><div class=""><span class="Apple-tab-span" style="white-space: pre;"> </span>Eric Pettersen</div><div class=""><span class="Apple-tab-span" style="white-space: pre;"> </span>UCSF Computer Graphics Lab</div></div>
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<br class=""><div><blockquote type="cite" class=""><div class="">On Oct 16, 2015, at 9:14 AM, George Tzotzos <<a href="mailto:gtzotzos@me.com" class="">gtzotzos@me.com</a>> wrote:</div><br class="Apple-interchange-newline"><div class="">Hi everybody,<br class=""><br class="">I’m attaching a snapshot of the output of a Consurf job (snapshot1). Trying to save the file in EPS format produces only A PART of the right-hand-side pane of the output. No histogram is produced (see output.eps).<br class=""><br class="">I’d appreciate any suggestions as to how to produce a complete output.<br class=""><br class="">Thank you in advance<br class=""><br class="">George<br class=""><br class=""><span id="cid:466FD835-EBE7-4742-8555-6B6AD309C4D0@cgl.ucsf.edu"><snapshot1.tiff></span><span id="cid:5EA7B0A5-5E7A-49AB-8EA1-528DF9EF95D7@cgl.ucsf.edu"><output.eps></span><br class=""><br class="">_______________________________________________<br class="">Chimera-users mailing list<br class=""><a href="mailto:Chimera-users@cgl.ucsf.edu" class="">Chimera-users@cgl.ucsf.edu</a><br class="">http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users<br class=""></div></blockquote></div><br class=""></div></body></html>