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</o:shapelayout></xml><![endif]--></head><body lang=EN-US link=blue vlink=purple><div class=WordSection1><p class=MsoNormal>In August there was a discussion entitled “Minimization and mystery nonstandard HIS atom name” and that’s the exact problem supposed to have been solved last year. What I did is similar to Jason (<a href="http://www.cgl.ucsf.edu/pipermail/chimera-users/2013-August/009069.html">http://www.cgl.ucsf.edu/pipermail/chimera-users/2013-August/009069.html</a>), and unfortunately I’m unable to resolve the problem, giving that I’m using chimera 1.8.1 on a Win 7 32G RAM computer. I attach two files, one succeeded till completion while the other one failed early. What I did is simply “Structure editing”, next, ok, next, ….<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Charges of 0.0 were assigned to the unknown atoms<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>1 model(s) had non-integral total charge<o:p></o:p></p><p class=MsoNormal>Details in reply log<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>No MMTK name for atom "HC1" in standard residue "ALA"<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Any suggestions to fix the problem is highly appreciated because Chimera is so impressive and I’ve been using it for many good analyses already. A pity to give up and switch to other programs at this very last stage.<o:p></o:p></p><p class=MsoNormal><b><o:p> </o:p></b></p><p class=MsoNormal><o:p> </o:p></p></div></body></html>