<div dir="ltr"><br><div class="gmail_quote"><div dir="ltr"><div><div>Dear chimera users,<br><br></div>I'm trying comparative modeling tutorial in chimera tutorials and I'm getting the following error in using fetch uniprot id.<br>
</div><div><br><b>Steps followed:<br>
</b></div><div>Menu--> fetch by ID--> selected uniprot--> "oprd_human" "P41143" (tried all combinations)<br></div><div><br></div><div><b>Error:</b><br><br><br><b>BadStatusLine: ''<br>
<br>
File "C:\Program Files\Chimera 1.7\bin\lib\httplib.py", line 371, in _read_status<br> raise BadStatusLine(line)<br><br>See reply log for Python traceback.<br><br></b></div>I tried changing the preference to use "http" but nothing fix it. please help.<span class=""><font color="#888888"><br clear="all">
<div><div><div><br></div></div></div></font></span></div></div>The detailed error is given below<br><br><class 'httplib.BadStatusLine'> Exception in Tk callback<br> Function: <bound method MidasUI.processCommand of <Midas.midas_ui.MidasUI instance at 0x048CA508>> (type: <type 'instancemethod'>)<br>
Args: (<Tkinter.Event instance at 0x064D9300>,)<br> Event type: KeyPress (type num: 2)<br>Traceback (innermost last):<br> File "C:\Program Files\Chimera 1.7\bin\lib\site-packages\Pmw\Pmw_1_3\lib\PmwBase.py", line 1747, in __call__<br>
return apply(self.func, args)<br> File "C:\Program Files\Chimera 1.7\share\Midas\midas_ui.py", line 270, in processCommand<br> midas_text.makeCommand(cmdText)<br> File "C:\Program Files\Chimera 1.7\share\Midas\midas_text.py", line 69, in makeCommand<br>
f(c, args)<br> File "C:\Program Files\Chimera 1.7\share\Midas\midas_text.py", line 1449, in doOpen<br> modelArg, noprefs)<br> File "<string>", line 1, in <module><br> None<br> File "C:\Program Files\Chimera 1.7\share\Midas\__init__.py", line 2033, in open<br>
noprefs=noprefs)<br> File "C:\Program Files\Chimera 1.7\share\chimera\__init__.py", line 1745, in open<br> models = func(filename, *args, **kw)<br> File "C:\Program Files\Chimera 1.7\share\SeqAnnotations\ChimeraExtension.py", line 27, in showUniprotSeq<br>
self.module().showUniprotSeq(ident)<br> File "C:\Program Files\Chimera 1.7\share\SeqAnnotations\__init__.py", line 302, in showUniprotSeq<br> acc = mapUniprotNameID(ident)<br> File "C:\Program Files\Chimera 1.7\share\SeqAnnotations\__init__.py", line 62, in mapUniprotNameID<br>
response = urllib2.urlopen(request)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 126, in urlopen<br> return _opener.open(url, data, timeout)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 406, in open<br>
response = meth(req, response)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 519, in http_response<br> 'http', request, response, code, msg, hdrs)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 438, in error<br>
result = self._call_chain(*args)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 378, in _call_chain<br> result = func(*args)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 625, in http_error_302<br>
return self.parent.open(new, timeout=req.timeout)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 400, in open<br> response = self._open(req, data)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 418, in _open<br>
'_open', req)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 378, in _call_chain<br> result = func(*args)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 1207, in http_open<br>
return self.do_open(httplib.HTTPConnection, req)<br> File "C:\Program Files\Chimera 1.7\bin\lib\urllib2.py", line 1180, in do_open<br> r = h.getresponse(buffering=True)<br> File "C:\Program Files\Chimera 1.7\bin\lib\httplib.py", line 1030, in getresponse<br>
response.begin()<br> File "C:\Program Files\Chimera 1.7\bin\lib\httplib.py", line 407, in begin<br> version, status, reason = self._read_status()<br> File "C:\Program Files\Chimera 1.7\bin\lib\httplib.py", line 371, in _read_status<br>
raise BadStatusLine(line)<br><class 'httplib.BadStatusLine'>: ''<br><br>================================================<br> Event contents:<br> char: <br> delta: 13<br> height: ??<br>
keycode: 13<br>
keysym: Return<br> keysym_num: 65293<br> num: ??<br> serial: 38444<br> state: 8<br> time: 69416531<br> type: 2<br> widget: .44391680.76326552.76670056.76670616.76670816<br> width: ??<br> x: 174<br>
x_root: 227<br> y: 13<br> y_root: 942<br><br>BadStatusLine: ''<br><br> File "C:\Program Files\Chimera 1.7\bin\lib\httplib.py", line 371, in _read_status<br> raise BadStatusLine(line)<br><br>
See reply log for Python traceback.<br><br clear="all"><div><br>-- <br><div dir="ltr">regards,<br>Pavithra.K.B. </div>
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