<html><body><div style="color:#000; background-color:#fff; font-family:garamond, new york, times, serif;font-size:14pt"><div>Hello I want to know how chimera does Structural allignment. I am writing a python script to allign protein structures(from MD simulations) and eventually calculate RMSD. Please can anyone provide me a source code or a helping material.Thanx in advance.</div><div><br></div><div style="color: rgb(0, 0, 0); font-size: 18.6667px; font-family: garamond,new york,times,serif; background-color: transparent; font-style: normal;"><br></div><div style="color:rgb(0, 0, 0);font-size:18.67px;background-color:transparent;font-style:normal;">Hira Batool</div><div style="color:rgb(0, 0, 0);font-size:18.67px;background-color:transparent;font-style:normal;">Student of BS-Bioinformatics<br>Biosciences Department<br>COMSATS Institute of Information Technology<br>Islamabad, PAKISTAN</div></div></body></html>