<div dir="ltr"><div><div>Hi,<br><br></div>I am interested in measuring the deviation of an helical segment with respect to the initial structure in a GROMACS trajectory. I have already uploaded my *.tpr and *.trr files into MD Movie and have defined a plane through the helical segment within the initial structure. Is it possible to define another plane through the same helix and track the intersection angle throughout the trajectory?<br>
<br></div>Thank you,<br>Lili<br></div>