Hi everyone,<div><br></div><div>To color a trajectory by RMSD, comparing each frame to the final frame. My approach was to save the last frame of the trajectory as a pdb, load it as a separate model, and then run something like this script:</div>
<div><br></div><div><p style="margin:0in;font-family:Calibri;font-size:11pt">mm #0 #1 show true</p>
<p style="margin:0in;font-family:Calibri;font-size:11.0pt">rangecolor mavRMSD
min white mid pink max red</p><p style="margin:0in;font-family:Calibri;font-size:11.0pt"><br></p><p style="margin:0in;font-family:Calibri;font-size:11.0pt"><br></p></div><div>This works, but of course my screen quickly fills with multialign-viewer windows. Without "show true" in the script, coloring doesn't work past the first frame. Is there a way to do this without displaying the MAV window?</div>
<div><br></div><div>thanks</div><div>Dan</div><div><br></div><div><br><div><div><br></div>-- <br>____________________________<br><br>Daniel Gurnon, Ph. D.<br>Associate Professor of Chemistry and Biochemistry<br>DePauw University<br>
Greencastle, IN 46135<br><br>p: 765-658-6279<br>e: <a href="mailto:danielgurnon@depauw.edu" target="_blank">danielgurnon@depauw.edu</a><br>
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