<div class="gmail_extra">Hi Elaine,</div><div class="gmail_extra"><br></div><div class="gmail_extra">Thank you very much! It work!</div><div class="gmail_extra">I have to study more about Chimera.</div><div class="gmail_extra">
<br></div><div class="gmail_extra">Thanks again!</div><div class="gmail_extra"><br></div><div class="gmail_extra">Junfeng</div><div class="gmail_extra"><br></div><div class="gmail_extra">Sun Yat-sen University</div><div class="gmail_extra">
Guangzhou, China <br><br><br><div class="gmail_quote">On Wed, Apr 25, 2012 at 12:23 AM, Elaine Meng <span dir="ltr"><<a href="mailto:meng@cgl.ucsf.edu" target="_blank">meng@cgl.ucsf.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hi Junfeng,<br>
Use command: ~longbond<br>
<br>
<<a href="http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/longbond.html" target="_blank">http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/longbond.html</a>><br>
<br>
(the command line can be shown using the menu: Favorites... Command Line)<br>
<br>
I hope this helps,<br>
Elaine<br>
----------<br>
Elaine C. Meng, Ph.D.<br>
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab<br>
Department of Pharmaceutical Chemistry<br>
University of California, San Francisco<br>
<div><div class="h5"><br>
On Apr 23, 2012, at 7:58 PM, Junfeng Huang wrote:<br>
<br>
> Hello Everyone,<br>
><br>
> I have a problem while display PDB file.<br>
><br>
> I extract the residues from protein-protein interface by ligplus into a new PDB file, and want to display and analysis it. As the file contain only the residues form interface, they are discontinuous.<br>
><br>
> While display with pymol, it is OK. However, While using Chimera, there are many dotted lines between the residues. I know what the dotted lines are, but I do want to hide all these lines, can somebody please give me some hints?<br>
><br>
> I sent two figures in the attachment. It's the first time I used mail-list, if it doesn't support figures, please check here:<br>
><br>
> Interface display by pymol<br>
> <a href="http://bbs.sysu.edu.cn/attach/Pictures/1335235173.JPG" target="_blank">http://bbs.sysu.edu.cn/attach/Pictures/1335235173.JPG</a><br>
><br>
> Interface display by Chimera<br>
> <a href="http://bbs.sysu.edu.cn/attach/Pictures/1335235254.JPG" target="_blank">http://bbs.sysu.edu.cn/attach/Pictures/1335235254.JPG</a><br>
><br>
> Thank you very much!<br>
</div></div>> <interface_pymol.png><interface_Chimera.png><br>
</blockquote></div><br></div>