<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Yes, just fixed that bug. Either you can wait for tomorrow's daily build, or you can edit line 247 of /Applications/Chimera.app/Contents/Resources/share/MultAlignViewer/ModellerBase.py and change 'loopData' to 'loopInfo'. Sorry for the hassle.<div><br></div><div>--Eric</div><div><br></div><div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font-size: 16px; "><font face="Helvetica" size="5" style="font: normal normal normal 16px/normal Helvetica; "> Eric Pettersen</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font-size: 16px; "><font face="Helvetica" size="5" style="font: normal normal normal 16px/normal Helvetica; "> UCSF Computer Graphics Lab</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font-size: 16px; "><font face="Helvetica" size="5" style="font: normal normal normal 16px/normal Helvetica; "> <a href="http://www.cgl.ucsf.edu">http://www.cgl.ucsf.edu</a></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font-size: 16px; "><font face="Helvetica" size="5" style="font: normal normal normal 16px/normal Helvetica; "><br></font></div><div><div>On Apr 19, 2012, at 2:50 PM, Sadler, Evan wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; color: rgb(0, 0, 0); font-size: 14px; font-family: Calibri, sans-serif; "><div>Hi,</div><div><br></div><div>I'm trying to construct what I think should be a simple homology model and it's failing as below whether I use the web server or run modeller locally:</div><div><br></div><div><div>Target seq: VWF_CK</div><div>Template structures: </div><div><span class="Apple-tab-span" style="white-space:pre"> </span>2TGI.pdb (#0)Run locally, the Modeller binary location: /Library/modeller-9.10/bin/mod9.10</div><div>Now, modeller is running locally...</div><div><type 'exceptions.UnboundLocalError'> Exception in Tk callback</div><div> Function: <function command at 0x17982770> (type: <type 'function'>)</div><div> Args: ()</div><div>Traceback (innermost last):</div><div> File "/Applications/Chimera.app/Contents/Resources/lib/python2.7/site-packages/Pmw/Pmw_1_3/lib/PmwBase.py", line 1747, in __call__</div><div> return apply(self.func, args)</div><div> File "/Applications/Chimera.app/Contents/Resources/share/chimera/baseDialog.py", line 449, in command</div><div> getattr(s, buttonFuncName(txt))()</div><div> File "/Applications/Chimera.app/Contents/Resources/share/chimera/baseDialog.py", line 700, in OK</div><div> self.Apply()</div><div> File "/Applications/Chimera.app/Contents/Resources/share/MultAlignViewer/ModellerDialog.py", line 579, in Apply</div><div> veryFast=self.veryFastVar.get(), tempPath=self.pathTempOpt.get().strip(), **kw)</div><div> File "/Applications/Chimera.app/Contents/Resources/share/MultAlignViewer/ModellerBase.py", line 247, in model</div><div> if loopData:</div><div><type 'exceptions.UnboundLocalError'>: local variable 'loopData' referenced before assignment</div><div><br></div><div>UnboundLocalError: local variable 'loopData' referenced before assignment</div><div><br></div><div> File "/Applications/Chimera.app/Contents/Resources/share/MultAlignViewer/ModellerBase.py", line 247, in model</div><div> if loopData:</div><div><br></div><div>See reply log for Python traceback.</div></div><div><br></div><div><br></div><div>My version of Chimera is alpha version 1.7 build 36205, running under Mac 10.6.8.</div><div><br></div><div>Do you have any advice?</div><div><br></div><div>Thanks,</div><div><br></div><div>Evan Sadler</div><div><div><div>-- </div><div>J. Evan Sadler, M.D., Ph.D.</div><div>Chief, Division of Hematology</div><div>Department of Medicine</div><div>Washington University</div><div>660 S. Euclid Ave., Box 8125</div><div>St. Louis, MO 63110</div><div>Tel: 314-362-9067</div><div>FAX: 314-454-3012</div><div>email: <a href="mailto:esadler@wustl.edu">esadler@wustl.edu</a></div><div><br></div></div></div></div> _______________________________________________<br>Chimera-users mailing list<br><a href="mailto:Chimera-users@cgl.ucsf.edu">Chimera-users@cgl.ucsf.edu</a><br>http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users<br></blockquote></div><br></div><br><div apple-content-edited="true"><span class="Apple-style-span" style="border-collapse: separate; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; -webkit-text-decorations-in-effect: none; text-indent: 0px; -webkit-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><br><br class="Apple-interchange-newline"></div></span> </div><br></body></html>