<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div><div>On Jan 27, 2010, at 10:02 AM, Michael Zimmermann wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div>Dear Chimera users,<br><br>I am getting to know Chimera a bit more and was just going through the<br>scripting tutorial here:<br><a href="http://www.cgl.ucsf.edu/Outreach/Workshops/UCSF-Fall-2005/09-ScriptDemo/Scripting_Tutorial.html">http://www.cgl.ucsf.edu/Outreach/Workshops/UCSF-Fall-2005/09-ScriptDemo/Scripting_Tutorial.html</a><br><br>For the command line script 1gfl.com, the tutorial just says "run it"<br>but does not say how. I just typed "run 1gfl.com" in the chimera<br>command line, but I get a syntax error in the script. I can't seem to<br>copy the error text, so a screenshot is attached. Is this an issue<br>with the script or how I am running it?<br><br>I use chimera v. 1.4 on win XP - 64bit</div></blockquote><br></div><div>It's an issue with how you are running it. There is no "run" command per se, but since Chimera allows you to shorten command names "run" is equivalent to "runscript", which executes a <i>Python</i> script (optionally with arguments). Since the script is Chimera commands, not Python, you naturally get a syntax error. To run the script you should use the "open" command or File...Open in the menus.</div><div><br></div><div>--Eric</div><div><br></div><div><div><span class="Apple-style-span" style="border-collapse: separate; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 16px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; -webkit-text-decorations-in-effect: none; text-indent: 0px; -webkit-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="5" style="font: normal normal normal 16px/normal Helvetica; "> Eric Pettersen</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="5" style="font: normal normal normal 16px/normal Helvetica; "> UCSF Computer Graphics Lab</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="5" style="font: normal normal normal 16px/normal Helvetica; "> <a href="http://www.cgl.ucsf.edu">http://www.cgl.ucsf.edu</a></font></div><br class="Apple-interchange-newline"></div></span></div><br><div></div></div></body></html>