Friends,<br>When i try to show the surface sometimes, i get a chimera warning that ' calculation of some surface components failed, falling back to single component calculation'.<br>The message in reply log is as follows. Kindly enlighten me on what is causing the problem.<br>
<br>Calculation of some surface components failed.<br>Falling back to single-component calculation.<br>/home/cbala/chimera/bin/mscalc 1.400000 2.000000 0<br>MSMSLIB 1.3 started on RAMANA<br>Copyright M.F. Sanner (March 2000)<br>
Compilation flags <br>WARNING: check_SES_edge: weird case, 1 probe full1 and not full2<br>WARNING: class_arete2: warning hole in a reentrant face 2119<br>WARNING: classe_aretes2: No cycle in face 3781 (nba=-6)<br><br>WARNING: classe_aretes2: No cycle in face 11830 (nba=-4)<br>
<br>WARNING: classe_aretes2: No cycle in face 19652 (nba=4)<br><br>WARNING: classe_aretes2: No cycle in face 19653 (nba=-1)<br><br>WARNING: classe_aretes2: No cycle in face 19663 (nba=-3)<br><br>RESTART FROM SES: 1<br>radius of atom 1220 goes from 1.625000 to 1.725000<br>
radius of atom 1221 goes from 1.000000 to 1.100000<br>radius of atom 1665 goes from 1.700000 to 1.800000<br>radius of atom 1666 goes from 1.000000 to 1.100000<br>radius of atom 3490 goes from 1.500000 to 1.600000<br>radius of atom 3618 goes from 1.000000 to 1.100000<br>
radius of atom 3620 goes from 1.500000 to 1.600000<br>radius of atom 3621 goes from 1.000000 to 1.100000<br>radius of atom 5103 goes from 1.625000 to 1.725000<br>radius of atom 5106 goes from 1.000000 to 1.100000<br>Partial mode<br>
WARNING: class_arete2: warning hole in a reentrant face 2119<br>RESTART FROM TRI: 2<br>radius of atom 470 goes from 1.700000 to 1.800000<br>radius of atom 4231 goes from 1.700000 to 1.800000<br>radius of atom 4250 goes from 1.480000 to 1.580000<br>
Partial mode<br><br>Surface black.pdb, category main, probe radius 1.4, vertex density 2<br> 1 connected surface components<br> Total solvent excluded surface area = 16352.1<br> Total solvent accessible surface area = 17959.3<br>
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