Hi all<br><br>I'm trying to build a 3D structure from this smile text:<br><br>N[C@@H](C)C(=O)O
<br><br>But the program stops and doesn't respond to any key. The log window shows the next message:<br><br><type 'exceptions.KeyboardInterrupt'> Exception in Tk callback<br> Function: <bound method BuildStructureDialog._placeAtoms of <BuildStructure.gui.BuildStructureDialog instance at 0x31ca3b0>> (type: <type 'instancemethod'>)<br>
Args: ()<br>Traceback (innermost last):<br> File "CHIMERA/lib/python2.5/site-packages/Pmw/Pmw_1_3/lib/PmwBase.py", line 1747, in __call__<br> None<br> File "CHIMERA/share/BuildStructure/gui.py", line 632, in _placeAtoms<br>
None<br> File "CHIMERA/share/BuildStructure/Smiles.py", line 15, in openSmiles<br> None<br> File "CHIMERA/share/BuildStructure/Smiles.py", line 21, in smiles2mol<br> None<br> File "CHIMERA/share/BuildStructure/SOAPpy/WSDL.py", line 61, in __init__<br>
None<br> File "CHIMERA/lib/python2.5/urllib.py", line 82, in urlopen<br> return opener.open(url)<br> File "CHIMERA/lib/python2.5/urllib.py", line 190, in open<br> return getattr(self, name)(url)<br>
File "CHIMERA/lib/python2.5/urllib.py", line 325, in open_http<br> h.endheaders()<br> File "CHIMERA/lib/python2.5/httplib.py", line 860, in endheaders<br> self._send_output()<br> File "CHIMERA/lib/python2.5/httplib.py", line 732, in _send_output<br>
self.send(msg)<br> File "CHIMERA/lib/python2.5/httplib.py", line 699, in send<br> self.connect()<br> File "CHIMERA/lib/python2.5/httplib.py", line 673, in connect<br> self.sock.connect(sa)<br>
File "<string>", line 1, in connect<br> None<br><type 'exceptions.KeyboardInterrupt'>: <br><br>Am I doing something wrong? <br>I am working with this chimera version: alpha version, build 2577, 2008/12/09 <br>
<br clear="all"><br>-- <br>Dr. Sergio Garay<br>Facultad de Bioquimica y Cs. Biológicas<br>Universidad Nacional del Litoral<br>Santa Fe - Argentina<br>C.C. 242 - Ciudad Universitaria - C.P. S3000ZAA<br>Argentina<br>Ph. +54 (342) 4575-213<br>
Fax. +54 (342) 4575-221 <br>