<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="color: rgb(0, 0, 0); font-family: Times; "><pre><span class="Apple-style-span" style="font-family: Helvetica; font-size: 16px; white-space: normal; ">Hernando Sosa wrote:</span></pre></span><blockquote type="cite" class=""><span class="Apple-style-span" style="color: rgb(0, 0, 0); font-family: Times; "><pre>Hi Elaine,
The problem I have is actually not with chimera itself. I can
display all the models etc nicely within it. However, I want to make
now a PDB file of a multi-protein complex in a format that can be
deposited in the PDB database. Then I run into problems if the models
are separated by Model ENDMDL lines or have chains with the same letter
identifier. I was hoping to be able to generate a multi-protein PDB
file from my chimera fitting without having to manually edit a lot of
lines in the multimodel PDB file. Any suggestions on how to best do this
would be appreciated.
<br></pre></span></blockquote>Hi Hernando,<div><span class="Apple-tab-span" style="white-space:pre"> </span>Elaine kind of mentioned this in passing in another posting, but you can now do what you wanted to do above with the new "combine" command (also available as the Combine button of the Model Panel). It's in the current daily build and upcoming release candidate/production release.<br></div><div><br></div><div>--Eric</div><br><br><div apple-content-edited="true"> <span class="Apple-style-span" style="border-collapse: separate; border-spacing: 0px 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 16px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: auto; -khtml-text-decorations-in-effect: none; text-indent: 0px; -apple-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><div style="word-wrap: break-word; -khtml-nbsp-mode: space; -khtml-line-break: after-white-space; "><p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="5" style="font: 16.0px Helvetica"><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span></span>Eric Pettersen</font></p><p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="5" style="font: 16.0px Helvetica"><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span></span>UCSF Computer Graphics Lab</font></p><p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="5" style="font: 16.0px Helvetica"><span class="Apple-converted-space"> </span><a href="http://www.cgl.ucsf.edu">http://www.cgl.ucsf.edu</a></font></p><br class="Apple-interchange-newline"></div></span> </div><br></body></html>