<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">The only thing I would add is that if you are working with a small molecule, you can use the Structure Diagram tool (under Utilities) to draw a 2-D representation of the molecule that includes bond-order depiction.<div><br></div><div>--Eric</div><div><br><div apple-content-edited="true"> <span class="Apple-style-span" style="border-collapse: separate; border-spacing: 0px 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 16px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: auto; -khtml-text-decorations-in-effect: none; text-indent: 0px; -apple-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><div style="word-wrap: break-word; -khtml-nbsp-mode: space; -khtml-line-break: after-white-space; "><p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="5" style="font: 16.0px Helvetica"><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span></span>Eric Pettersen</font></p><p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="5" style="font: 16.0px Helvetica"><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span></span>UCSF Computer Graphics Lab</font></p><p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="5" style="font: 16.0px Helvetica"><span class="Apple-converted-space"> </span><a href="http://www.cgl.ucsf.edu">http://www.cgl.ucsf.edu</a></font></p><br class="Apple-interchange-newline"></div></span> </div><br><div><div>On Jul 21, 2008, at 9:06 AM, Elaine Meng wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div>Hi Hatuey,<br>There is a search form for the chimera-users archive. Choose "Help... <br>Contact Us" from the Chimera menu to see the page with the search <br>forms (to get results you need to be connected to the Web, of course).<br><br>Usually I recommend searching the documentation first (Choose "Help... <br>Search Documentation") because that will give up-to-date information. <br>What you get by searching the mailing list may include some old <br>information that is not helpful or relevant to newer versions of <br>Chimera. The documentation search can take boolean combinations of <br>terms.<br><br>Currently, there is no way to differently display single/double/ <br>aromatic bonds, sorry. In this case, you wouldn't find anything in <br>the documentation, but might find this chimera-users message:<br><a href="http://www.cgl.ucsf.edu/pipermail/chimera-users/2006-September/000931.html">http://www.cgl.ucsf.edu/pipermail/chimera-users/2006-September/000931.html</a><br><br>Best,<br>Elaine<br>-----<br>Elaine C. Meng, Ph.D. meng@cgl.ucsf.edu<br>UCSF Computer Graphics Lab and Babbitt Lab<br>Department of Pharmaceutical Chemistry<br>University of California, San Francisco<br> http://www.cgl.ucsf.edu/home/meng/index.html<br><br><br>On Jul 21, 2008, at 5:10 AM, Hatuey Hack wrote:<br><br><blockquote type="cite">Hi all,<br></blockquote><blockquote type="cite">I have to questions about Chimera:<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">1st.- Is it possible to search the mailing list to avoid doing <br></blockquote><blockquote type="cite">questions that were already answered?<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">2nd.- As I do not know the answer to the first question, I would <br></blockquote><blockquote type="cite">like to know how I can visualize double and triple bound as well as <br></blockquote><blockquote type="cite">aromatic rings explicitly within Chimera.<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">Regards,<br></blockquote><blockquote type="cite">Hatuey<br></blockquote><br>_______________________________________________<br>Chimera-users mailing list<br>Chimera-users@cgl.ucsf.edu<br>http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users<br></div></blockquote></div><br></div></body></html>