[Chimera-users] Move model with associated map?

Oliver Clarke olibclarke at gmail.com
Tue May 10 09:50:47 PDT 2022

I answered my own question - matrixcopy does the trick! For anyone facing the same issue:

Let's say I have two structures (#1 with associated density map #2 and #3 with associated density map #4):

1. mmaker #1 #3 to align #3 on #1.

2. matrixcopy #3 #4 to apply the transformation matrix determined by mmaker onto the second density map.


> On May 10, 2022, at 11:02 AM, Oliver Clarke <olibclarke at gmail.com> wrote:
> Hi all,
> Is there any way to apply the same transformation used by matchmaker for alignment to a map?
> I have two structures (map+atomic model) in different frames of reference. I would like to align one structure on the other, but also move the associated map in the same way. Is this possible?
> Cheers
> Oli

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