[Chimera-users] color maps based on real space cross correlation

Tom Goddard goddard at sonic.net
Wed Jun 16 09:55:33 PDT 2021


This old message describes how to color a map by local correlation using the Chimera vop localCorrelation command

	https://www.cgl.ucsf.edu/pipermail/chimera-users/2012-October/008076.html <https://www.cgl.ucsf.edu/pipermail/chimera-users/2012-October/008076.html>

  Tom


> On Jun 16, 2021, at 12:41 AM, manikandank via Chimera-users <chimera-users at cgl.ucsf.edu> wrote:
> 
> Hi Chimera-users,
> 
> 
> 
> I have aligned two cryoEM maps at certain threshold using 'Fit in Map' option in chimera.
> 
> Now I would like to color one map based on real space voxel correlation values from 'Fit in Map' operation.
> 
> Please let me know how this can be done in chimera.
> 
> 
> 
> thank you
> 
> 
> 
> with kind regards
> 
> 
> 
> Mani.
> 
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