[Chimera-users] On pdb structure match or align

Smith Lee smith_lee123 at yahoo.com
Tue Feb 23 05:51:26 PST 2021

Dear All,
With chimera I open A.pdb abd B.pdb. A.pdb contains domain a and doain b, B.pdb contains domain b and domain c, which is to say, the 2 structures share a common domain b.
Will you please tell me the chimera specific command to align or match the 2 structures based fully on the common domain b in each structure, without consideration of the domain a and domain c for calculation of the alignment?
Best wishes,

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