[Chimera-users] How to save a dragged pdb
lixiongjun228 at qq.com
Tue May 12 07:50:43 PDT 2020
Thank you, it works well.
From: "Elaine Meng"<meng at cgl.ucsf.edu>
Date: Tue, May 12, 2020 22:46 PM
To: "李雄俊"<lixiongjun228 at qq.com>;
Cc: "chimera-users"<chimera-users at cgl.ucsf.edu>;
Subject: Re: [Chimera-users] How to save a dragged pdb
See the "Save relative to" near the bottom of the PDB Save dialog. In your image it is saving relative to #0, a pdb file. You need to change the model in that line to the map model.
You can check in the Model Panel (menu: Favorites... Model Panel) to see which models are which numbers.
I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco
> On May 11, 2020, at 9:01 PM, 李雄俊 <lixiongjun228 at qq.com> wrote:
> I dragged a partial thread pdb to dock a volume map with UCSF-Chemira, but when I saved the pdb, and open the new pdb and the mrc file, they are still uncouple. Please point out the mistakes in my method, thank you very much.
> <30FDE806 at C4B4D716.A81FBA5E.jpg>
> fig 1. Yellow chain is the partial thread pdb, pink one is native pdb, grey one is the volume data.
> <3100E200 at AE407D4E.A81FBA5E.jpg>
> fig 2. After dragging, docked pdb and volume data
> <2CFDE501 at 53897A73.A81FBA5E.jpg>
> Fig 3. options of 'save pdb'
> After these actions, pdb and mrc are still uncouple when I reopen them in another Chemira.
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