[Chimera-users] visualizing distance restraints using Chimera

Elaine Meng meng at cgl.ucsf.edu
Tue Jul 16 10:09:50 PDT 2019


Make that “Chimera plugin,” NOT ChimeraX   … I got carried away with the X’s!

Elaine

> On Jul 16, 2019, at 10:03 AM, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> 
> Hello Matthew Fountain,
> See the ChimeraX plugin “Xlink Analyzer” available separately from this website:
> <https://www.embl-hamburg.de/XlinkAnalyzer/XlinkAnalyzer.html>
> 
> … see also publication (open access):
> Xlink Analyzer: software for analysis and visualization of cross-linking data in the context of three-dimensional structures.
> Kosinski J, von Appen A, Ori A, Karius K, Müller CW, Beck M.
> J Struct Biol. 2015 Mar;189(3):177-83.
> <https://www.sciencedirect.com/science/article/pii/S1047847715000301>
> 
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
>> On Jul 16, 2019, at 8:43 AM, Matthew Fountain <Matthew.Fountain at fredonia.edu> wrote:
>> 
>> Is there any way to import a list of distance restraints and have Chimera display them based on the restraint violation.
>> -- 
>> Matthew Fountain
>> Professor and Chair
>> Fredonia State University of New York
>> Chemistry and Biochemistry Department
> 
> 
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