[Chimera-users] metadata mrc files

[Elaine Meng]

Hi Tom,
There is a “dumpHeaders” option of the volume command to send info to the Reply Log, e.g.

vol #1 dump true

<http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/volume.html#output>

I believe that group/ungroup models is only in the Model Panel.  Undoubtedly it could be done with python, but someone else would have to help with that.  (Best to send questions to the list since the “group knowledge” exceeds mine!)

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Jan 4, 2019, at 5:36 AM, Tom Marlovits <thomas.marlovits at cssb-hamburg.de> wrote:
> 
> Elaine,
> one more question … is there a command file to also group models?
> Thx
> Tom
> 
>> 
>> Hi Elaine,
>> is there an easy solution to read out the header metadata of an .mrc file in chimera and report it to a text file?
>> Thx
>> Tom
>> 
>> Number of columns, rows, sections .....      80      80      80
>> Map mode ..............................    2   (32-bit real)              
>> Start cols, rows, sects, grid x,y,z ...    0     0     0      80     80     80
>> Pixel spacing (Angstroms)..............  0.6370     0.6370     0.6370    
>> Cell angles ...........................   90.000   90.000   90.000
>> Fast, medium, slow axes ...............    X    Y    Z
>> Origin on x,y,z .......................   -25.48      -25.48      -25.48    
>> Minimum density ....................... -0.80182E-01
>> Maximum density .......................  0.11564    
>> Mean density ..........................  0.19742E-03
>> tilt angles (original,current) ........   0.0   0.0   0.0   0.0   0.0   0.0
>> Space group,# extra bytes,idtype,lens .