[Chimera-users] Using ChimeraX in no-gui mode
James Starlight
jmsstarlight at gmail.com
Mon Apr 15 02:14:54 PDT 2019
Dear Chimera users!
Would be possible to use new ChimeraX for execution of some simple
scripts for structure visualisation and imaging via no-gui mode?
I am using bash script to loop over pdbs and would like to
1) open each pdb which contains b-factors info in chimeraX
2) apply preset publication
3) colour the pdb using "color byattribute bfactor palette rainbow ave residue"
4) save high quality image at the selected directory using chimera render
Would it be possible to do these things directly from linux terminal
providing each time pdb and some script file with the list of the
applied commands?
chimerax-daily ${pdb} ${script}
Thank you in advance!
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