[Chimera-users] max density value using a script

[Tamas Hegedus]

Dear Tom,

Thanks for the suggestion. However, I can not access these links and I 
can not find any way to get access those scripts.

???

Thanks, Tamas


On 09/06/2018 10:45 PM, Tom Goddard wrote:
> Hi Tamas,
>
> Here is Python code that computes max/min of one map subtracted from 
> another.  It assumes the maps are the same size and aligned.  If they 
> are different sizes or not aligned it will need some different code to 
> do interpolation of one of the maps.
>
> https://plato.cgl.ucsf.edu/trac/chimera/attachment/wiki/Scripts/mapdiff.py
>
> More Chimera Python script examples are at
>
> https://plato.cgl.ucsf.edu/trac/chimera/attachment/wiki/Scripts
>
>   Tom
>
>
>> On Sep 6, 2018, at 2:34 AM, Tamas Hegedus wrote:
>>
>> Hi,
>>
>> I subtract two electron density maps and I would like to get the min 
>> and max density values of the resulted map. I can see these values in 
>> the GUI, but I would like to get them running chimera without a gui 
>> using a python script. (Without saving the final map into an .mrc 
>> file and reading the header of that file.)
>>
>> Thanks for your help,
>> Tamas
>>
>> -- 
>> Tamas Hegedus, PhD
>> Senior Research Fellow
>> Department of Biophysics and Radiation Biology
>> Semmelweis University     | phone: (36) 1-459 1500/60233
>> Tuzolto utca 37-47        | mailto:tamas at hegelab.org
>> Budapest, 1094, Hungary   | http://www.hegelab.org
>> _______________________________________________
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>>
>

-- 
Tamas Hegedus, PhD
Senior Research Fellow
MTA-SE Molecular Biophysics Research Group
Hungarian Academy of Sciences  | phone: (36) 1-459 1500/60233
Semmelweis University          | fax:   (36) 1-266 6656
Tuzolto utca 37-47             | mailto:tamas at hegelab.org
Budapest, 1094, Hungary        | http://www.hegelab.org

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