[Chimera-users] Basic question re: nucleotide sequence

Pecot, Chad V. pecot at email.unc.edu
Sat Nov 24 16:57:35 PST 2018


I am trying to use Chimera to predict the structure of a nucleotide sequence that does not have a PDB ID. This is an unstudied protein, and I’m hoping to get some structure information and to visualize it using the software.

I tried using the tutorials, but the best I can tell it appears to work off of already available PDB IDs.

Is there a way I can enter the nucleotide sequences as a starting point? If so I’d really appreciate a few step/steps on how to do this.

Chad V. Pecot, M.D.
Assistant Professor
UNC Lineberger Comprehensive Cancer Center
Thoracic Medical Oncology
450 West Drive, Office 32.048
Chapel Hill, NC 27599
Office: 919-966-4779
Cell: 615-305-3955
Fax: (919) 966-6735
pecot at email.unc.edu

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