[Chimera-users] Secondary structure recognition issue in homology model

Monika Tokmina-Lukaszewska tokminalukas at gmail.com
Mon Nov 12 20:24:30 PST 2018

Dear Chimera Team,

In my homology model (see attachment) it looks like there has been some
issue with secondary structure recognition in one of the domains
(highlighted in cyan). In .py file I added one of the protein templates
(yellow) based on which the C-terminal domain was constructed. I am not
sure what has happened to a final model, since template for that domain
looks good. I was wondering if there is an option in Chimera which could
fix that issue?

Thank you for your time,
Monika Lukaszewska

Monika Lukaszewska, Ph.D.

Senior Research Scientist
Chemistry & Biochemistry Department
Montana State University
Bozeman MT, 59717
lab: (406) 994 5418
tokminalukas at montana.edu <tokminalukas at chemistry.montana.edu>
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