[Chimera-users] extract parts of a map based on 'volume data gradient norm'

Dieter Blaas dieter.blaas at meduniwien.ac.at
Thu Jun 14 22:43:41 PDT 2018


       I want to segment a map based on differences in 'volume data 
gradient norm' which I can adjust as to color the part of the volume I 
am interested in in blue and the one I want to get rid of in red. Is 
there a way of doing so? I admit that I never used the segger tool and 
do not know whether it would be appropriate for this task. The final aim 
is it to write out the blue volume!

Thanks for hints, bw, Dieter

Dieter Blaas,
Max F. Perutz Laboratories
Medical University of Vienna,
Inst. Med. Biochem., Vienna Biocenter (VBC),
Dr. Bohr Gasse 9/3,
A-1030 Vienna, Austria,
Tel: 0043 1 4277 61630,
Fax: 0043 1 4277 9616,
e-mail: dieter.blaas at meduniwien.ac.at

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