[Chimera-users] turning kdssp off

[Mateusz Sikora]

Dear Chimera users,


is there any way to turn the secondary structure assignment (kdssp) off?

I am transforming a set of coordinates from a MD trajectory into
electron density. I collapsed many frames of the trajectory into a
single file, meaning there are many unphysical overlaps (I only care
about the density). Problem is, that the PDB file I am opening is rather
large (couple of millions of atoms) and kdssp gets absolutely stuck on it.

I would appreciate some help.


Best regards,

Matt