[Chimera-users] Quantification of electron density volume

Priyamvada Acharya pacharya at nysbc.org
Fri Jan 26 23:30:39 PST 2018

Hi everyone,

I am wondering if there is a way to extract the values plotted under Tools > Volume Data > Values at Atom Positions?

Specifically, I would like to quantify the electron density surrounding a domain and compare it to another domain. This can be easily done if the values in the Histogram plotted under the tool mentioned above can be tabulated on a per-atom basis (perhaps within a PDB file, in the B-factor column).

If anyone knows other methods to achieve this goal, that would be helpful as well.

Thank you very much in advance for your feedback and suggestions!

Best regards,

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