[Chimera-users] crystal structure's electron density maps
Hernando J Sosa
hernando.sosa at einstein.yu.edu
Fri Feb 9 12:55:09 PST 2018
This works, Thanks Elaine.
Dept. of Physiology and Biophysics
Albert Einstein College of Medicine
1300 Morris Park Av.
Bronx NY 10461
phone (718) 430-3456
FAX (718) 430-8819
email hernando.sosa at einstein.yu.edu
From: Elaine Meng [mailto:meng at cgl.ucsf.edu]
Sent: Friday, February 09, 2018 1:34 PM
To: Hernando J Sosa
Cc: chimera-users at cgl.ucsf.edu
Subject: Re: [Chimera-users] crystal structure's electron density maps
The short answer is no, but we updated the EDS fetch to use PDBe, so I think you just need to get a newer Chimera (release 1.12 or newer). Just now I was able to fetch the data used in that tutorial, command
Chimera 1.12 release notes
I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco
> On Feb 9, 2018, at 9:32 AM, Hernando J Sosa <hernando.sosa at einstein.yu.edu> wrote:
> Dear UCSF-Chimera,
> Can Chimera calculate electron density maps from structure factor files (or link to an appropriate program)?. The tutorial (https://www.cgl.ucsf.edu/chimera/docs/UsersGuide/tutorials/density.html) suggest fetching the density map from the Electron Density Server, but this server is no longer available.
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