[Chimera-users] Batch mode for Chimera
meng at cgl.ucsf.edu
Wed Sep 6 09:34:51 PDT 2017
Yes, but then you don’t know which one of those commands might show the graphics driver problem! I guess you can experiment with which parts will work. The descriptions of the presets say what they include:
Then you can identify individual commands to do those things. Most of the stuff is in the “set” command, see
Publication preset 2 includes white background and silhouette edges, commands:
set bgcol white
It also turns off depth-cueing (mist):
… and changes to “licorice” style ribbons (which doesn’t show helix and strand differently):
You might also be interested in other “set” options (see link above), and “lighting”:
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco
> On Sep 6, 2017, at 12:49 AM, James Starlight <jmsstarlight at gmail.com> wrote:
> Thank you, Elaine!
> Regarding presets
> Is it possible to define step-by-step some commands to obtain
> something like preset 2 visualization state?
More information about the Chimera-users