[Chimera-users] Contact Maps (RRdistance Maps) questions:

Nicole Persky persky at broadinstitute.org
Wed Mar 22 12:44:29 PDT 2017

Hi All,
I've just found the RRdistance Map function on Chimera and
would like to compare between structures.
I would like to:
1- make contact map of protein 1 to protein 1 with a cutoff of about 6
2- make a contact map of protein 2 to protein 2 with a cutoff of about 6
3- compare these two contact maps using the colors available for the whole
contact map.

I can only seem to compare the ENTIRE contact map of protein 1 to the
ENTIRE map of protein 2, whereas I'd like to mask any contacts over 6

Alternatively, if anyone knows of a way to export residue lists of contacts
from the contact map site I could just compare them that way.

Anyone know of a way to map defined attributes onto a contact map?

Thanks so much!
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