[Chimera-users] model recordings

Elaine Meng meng at cgl.ucsf.edu
Wed Jun 7 12:37:49 PDT 2017

Hi Paul,
>From the manual page for Molecular Dynamics Simulation:

"Select model: The model of interest should be chosen by clicking to highlight its name in the list of models. All of the atoms for simulation should be included in this model; any other models will be ignored.”

You can see that page by clicking the Help button on the tool dialog, or view the copy on our website:


> On Jun 7, 2017, at 11:23 AM, pbuscemi <pbuscemi at q.com> wrote:
> Thanks Elaine,
> Your assumptions were correct..and I apologize for the poor description.
>  If I were to open the two files as two models - surface and water - and select only water to run the simulation ( only water is active ) would the water  know the surface was present ?
> Paul

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