[Chimera-users] B-Factor Difference Plot

Amanda Evans Constantinides aconstantinides1 at student.gsu.edu
Mon Aug 28 09:00:03 PDT 2017

I am plotting the B-factor differences between two similar structures. I do not understand why the plot is almost entirely on the positive side of the X-axis. If I open B factor putty models in PYMOL and in Chimera, there are some visible areas that should translate to negative B-factor differences on a quantitative plot. There is no way one structure is entirely more flexible than the other. Can you help explain this to me? Is there away to adjust the zero point to more accurately reflect these differences on the plot?

Thank you,

Amanda Constantinides
Graduate Research Assistant
Georgia State University

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