[Chimera-users] Regarding generating a .pdb file of peptide (Diglycine)

Dilip H N cy16f01.dilip at nitk.edu.in
Sun Aug 20 10:45:49 PDT 2017

I have install chimers in ubuntu 14.04..
I am finding difficult to get the .pdb format for diglyicne peptide...
1] If in Build Structure i select PubChem CID and type 11163 (Diglycine
PubChem CID) i am getting error as:-
Error fetching 11163:[Errno socket error] [SSL: CERTIFICATE_VERIFY_FAILED]
certificate verify failed (_ssi.c:590)
2] I even tried through File - Fetch by ID - Pubchem and typed 1163
(Diglycine PubChem CID).. but in vain..i am getting the same error..

So can anybody kindly help....i am a novice here..

Thank you...
With Best Regards,

Ph.D Student

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