[Chimera-users] (no subject)

Kavya Shankar kavshank at umail.iu.edu
Mon Apr 3 15:20:13 PDT 2017

Is that axis found by using a linear regression of some points that go
through the center of the dimer and then is the direction of the
axis found?

On Monday, April 3, 2017, Elaine Meng <meng at cgl.ucsf.edu> wrote:

> Matchmaker does not calculate the axis of symmetry, it superimposes the
> chains that you tell it to superimpose, as described in the link I sent
> earler. Then measure rotation figures out the axis and angle relationship
> between the two copies, also as described.
> Elaine
> > On Apr 3, 2017, at 1:03 PM, Kavya Shankar <kavshank at umail.iu.edu
> <javascript:;>> wrote:
> >
> > Hi,
> >
> > I learnt that a dimer axis of symmetry is got by using matchmaker and
> then the rotation is measured from it. I would like to know the algorithm
> that is used to calculate the axis of symmetry and how exactly it is done
> if possible.
> >
> > Thank you.
> >
> > Regards,
> > Kavya Shankar

Thank you.

Kavya Shankar
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