[Chimera-users] comparing maps with different orientations

Cathy Lawson cathy.lawson at rutgers.edu
Mon Oct 3 07:58:24 PDT 2016

Dear USCF Chimera Team,

I’m looking for suggestions on how to go about the following:
For the EMDataBank map challenge we have sets of EM maps of the same molecule that have been submitted in different orientations.
We’d like to automate production of images for each set of maps with a common orientation/scale so that they can be readily compared.
Models fitted to each map are in principle available, so this could be part the process if needed (e.g., to define transformations between map positions/orientations).

Many thanks,


Catherine Lawson, Ph.D.
Center for Integrative Proteomics Research
Rutgers University
cathy.lawson at rutgers.edu
USA +1 (848) 445 5494 

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