[Chimera-users] Modeller awareness of other proteins

Eiros Zamora, Juan j.eiros-zamora14 at imperial.ac.uk
Thu May 26 08:55:38 PDT 2016

Dear Chimera experts,

I’ve got a system of three interacting proteins, and each of them is missing some linker regions in the crystal structure.

I’ve succesfully used the Modeller interface in Chimera to add these regions, but the problem I’m facing now is that it adds the residues without considering that other atoms from another protein of the system are in the way.

Is there a way to tell Modeller to be sensitive to other structures nearby?

Thanks for any comments,

[Imperial College London] <http://www.icb-cdt.co.uk/>

Juan Eiros Zamora / PhD Student
je714 at ic.ac.uk<mailto:je714 at ic.ac.uk> / +44 (0) 7783018326

Imperial College London
Imperial College Road SW7 2AZ | UK

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