[Chimera-users] Selection of a CASTp/Surfnet cavity from command line

Felipe Vasquez anfelvas at gmail.com
Thu Mar 3 19:09:06 PST 2016


I was trying to automatize the selection of those residues members of a
certain cavity predicted by CASTp, starting from the opening of the file to
the writing of the residues list (all from command line). However, I do not
know how to select a cavity with an specific ID so I have not to do it
manually. There is a strategy to achieve this goal from the command line?
How could I do the same for Surfnet cavities?

Thanks in advance for your help.

Best regards,

*Andrés Felipe Vásquez J., BSc, MSc.*
Profesional - Grupo de Fisiología Molecular
Subdirección de Investigación Científica y Tecnológica
Dirección de Investigación en Salud Pública
Instituto Nacional de Salud
Avenida calle 26 No. 51-20 - Zona 6 CAN
+57 (1) 2207700 ext. 1419
Bogotá, D.C., Colombia
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