[Chimera-users] Showing color key programatically colouring from a volume...

Pablo Conesa pconesa at cnb.csic.es
Fri Dec 30 01:20:35 PST 2016

Sorry! I realized that I created the color key through the "Surface 
color" tool.

So, by default there is no color key. I think now this is not doable 
unless I set the color key in the script.

On 30/12/16 09:21, Pablo Conesa wrote:
> Dear all
> We have this simple script to open a volume (#0) coloured using values 
> from a second volume (#1):
> open betaGal.mrc
> open extra/MG_Chimera_resolution.vol
> volume #1 voxelSize 3.54
> vol #1 hide
> scolor #0 volume #1 cmap rainbow reverseColors True
> For scolor command we are using a volume.
> https://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/scolor.html#volume
> It would be nice to achieve something like this at start up (note the 
> color key is based on the volume):
> I've did it dragging the mouse over the canvas while "Color key" 
> utility is open.
> And, is there a posibility to round up the values. Some kind of:
> Psaudocode:
> Give the resulting color key
> for each round values
> display the color key
> I guess that if there is a way to get the color key, then rest can be 
> done through commands.
> Cheers, Pablo.
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