[Chimera-users] save gaussian volume filter as a new map?

H. Adam Steinberg adam at artforscience.com
Wed Apr 6 18:36:54 PDT 2016

Thank you Elaine, that works!

> On Apr 6, 2016, at 11:32 AM, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> Hi Adam,
> You can use "File… Save map as" from the Volume Viewer dialog’s menu, or the “save” option of the “volume” command:
> <http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/volumeviewer/volumeviewer.html#organization>
> <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/volume.html#output>
> <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/savemodel.html>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> On Apr 5, 2016, at 6:01 PM, H. Adam Steinberg <adam at artforscience.com> wrote:
>> Hi All,
>> How do I save a map that I applied a gaussian volume filter to?
>> I opened a cryo EMD map and then applied a gaussian volume filter to it with a width of 1.5 to clean up some of the extra detail. I would now like to save that map out of Chimera to use elsewhere.
>> When I save the Chimera file it says “EMD-6413.map gaussian was not saved with the session.To have them included in the session it must be saved in separate volume files before the session is saved.” How do I do that?

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