[Chimera-users] Electrostatic Potential based on Poisson-Boltzmann using APBS

leila karami karami.leila1 at gmail.com
Sat Jul 18 11:23:58 PDT 2015

Dear Elaine,

I checked the useful link.

I opened pr.pdb file (#0).

I used pdb2pqr. Then, a new pdb file was created.

I opened this new file (#1). Then, I used apbs molecule #1.

Then, I opened created dx file.

Unfortunately, surface is black and white.

I confused. Which part of my steps is wrong?

Please guide me to resolve this problem.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20150718/64a065f6/attachment.html>

More information about the Chimera-users mailing list