[Chimera-users] Regarding organic molecule minimization

Satheesh G gschemie at gmail.com
Sat Sep 27 06:15:47 PDT 2014

Dear Sir,

The azo compounds (organic molecule) minimization using Chimera software
giving linear form (R-N=N-R  to R-N=N-R (180 degrees bong angle between
R-N=N instead  R-N=N- 120 degrees). Which is not true. I have used the
gasteiger and  amber ff12sb force field. Please suggest me to solve this

Thanking you.


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