[Chimera-users] Can 'readstdin' capture stderr output?
g.m.carstairs at dundee.ac.uk
Thu Nov 13 02:24:06 PST 2014
I am working on ?driving Chimera from Jalview using the stdin/stdout mechanism (expecting to migrate to REST in future).
I have a case where a 'match' command fails, but the stdout response does not show this.
Using the Chimera command line I can see a message (I guess to stderr)
'Unequal numbers of atoms chosen for evaluation'
but in stdout I just see the same message as for a successful match e.g.:
'Executing match ['#1:1-69.B,96.B at CA', '#0:1-69.A,96.A at CA'], no iteration'
Is there a way to detect that the match has failed and/or capture the stderr output?
The University of Dundee is a registered Scottish Charity, No: SC015096
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