[Chimera-users] Preparation of the protein-ligand system for the amber simulation

James Starlight jmsstarlight at gmail.com
Tue Apr 29 03:45:49 PDT 2014

Dear Chimera Users,

I wounder to know if it's possible to use combination of the amber ff with
the cgenff for the both parametrization of the small ligands in complex
with the proteins using amber tools built in Chimera's? Does it possible to
use some scripts instead of GUI for such tasks ? I'll be thankfull for some
tutorial or example

Thanks for help,

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