[Chimera-users] save map with the adjusted threshold

Moumita Dutta dutta at bio.fsu.edu
Wed May 1 10:00:57 PDT 2013

Hi Elaine,

Yes I was asking about saving the map in mrc format only not the  
session which I have already saved.


Quoting "Elaine Meng" <meng at cgl.ucsf.edu>:

> Hi Moumita,
> Just saving a map file won't do it, but you can save a Chimera  
> session file (and later restore it, of course).  You have to keep  
> the map file too, but the session file has other information like  
> threshold and color.  Session save/restore are in the File menu, or  
> you can use commands.  Details here:
> <http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/sessions.html>
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> On Apr 30, 2013, at 8:09 PM, Moumita Dutta wrote:
>> Hello,
>> I'm not sure if I can do this in chimera. Once I open a density map  
>> and adjust the threshold and removed dust how can I save the map in  
>> this setting so that next time when I open it I don't have to  
>> adjust again.
>> Thanks

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