[Chimera-users] Transparent single atoms when rendering stereoimages

Elaine Meng meng at cgl.ucsf.edu
Sun Mar 17 10:06:34 PDT 2013

Hi Rebecca,
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Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Mar 16, 2013, at 6:53 PM, Rebecca Swett wrote:

> Hi, i'm rendering some peptides structures that have single magnesium and manganese atoms in frame, and when I save the images as a stereopair, the atoms
> render as transparent, with protein ribbon showing through. I've tried several different colors on this, I think it's just a bug. The tips of sidechains also are transparent where the atoms are showing. I"m using the windows 64 bit build, in 1.7, downloaded today.

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