[Chimera-users] Color surfaces

[Elaine Meng]

Hi Hernando,
You can do it with Color Zone (in menu under Tools...Volume Data, also in Volume Viewer "Tools" menu).  This colors surfaces to match nearby selected atoms or markers:

<http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/colorzone/colorzone.html>

I hope this helps,
Elaine
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Elaine C. Meng, Ph.D. 
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Jan 8, 2013, at 9:48 AM, Hernando J Sosa wrote:

> Hi
> I thought there is was way to color density surfaces according to the assigned color  of atoms close by (i.e. when there is an a atomic structure fitted into the density), but I can't remember if this was indeed possible or how to do it. Is there a way to do this ?
> Thanks
> Hernando