[Chimera-users] docking with flexible side-chains

Elaine Meng meng at cgl.ucsf.edu
Tue Apr 16 13:26:31 PDT 2013

Hi Thomas,
Sorry, it does not.  The Chimera interface to AutoDock Vina only includes a limited set of options, fully documented here (or if you click the Help button on the interface):


I hope this helps,
Elaine C. Meng, Ph.D. 
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Apr 16, 2013, at 12:43 PM, Thomas Evangelidis wrote:

> Dear Chimera developers,
> Isn't docking with flexible side-chains supported in the AutoDock Vina GUI? I am surprised I didn't find any pertinent information about it in the documentation or the mailing list archives.
> thanks,
> Thomas

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