[Chimera-users] crystal structure reconstruction

rainy908 at yahoo.com rainy908 at yahoo.com
Sat Sep 29 17:07:31 PDT 2012


Hi,

I am new to Chimera.  I have a PDB of a protein comprising of a loop region
that appears to have slight alpha-helical behavior when visualized in
Pymol.  However, I doubt that this region is actually structured, and that
this alpha-helical behavior is actually an artifact from experimental
conditions.

To double-check the validity of this loop, I was broadly advised that
"crystal structure reconstruction" can be performed in Chimera.  I suspect
this is either the 'molmap' or "Fit in Map" feature?

Sincerely,

Lili
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